Summer school: Data & Health

Big data and algorithms are profoundly transforming contemporary medicine.

The program of this interdisciplinary summer school will present the genetic and bioinformatics foundations of this evolution and its philosophical, ethical, legal, sociological and psychological issues. Each session will include a conference and a workshop on a specific case. Students will actively participate in the final synthesis.

Expected sessions

– Big data and health: legal issues

– Data, health and ethical issues

– Brugada syndrome and connectivity map approach

– Big data and medical diagnosis

– From basic research to the patient: contribution of integrated biology in mitochondrial diseases

– Big data and the patient

– Bioinformatics and health

One day in Nantes to visit a research institution and discover the city.

The aim is to provide an overview of a set of problems, related to the use of data in health, thanks to humanities and social sciences methods.The course is intended for students and researchers interested in medicine, genetics, bioinformatic, laws or humanities.

The program will be entirely taught in English.

More information

“Fitness Meets Niche Construction and Symbiosis”, Institute of Philosophy, Jagiellonian University, Kraków 2019

 

 

The term  fitness is used very often in evolutionary biology and plays a central role in  the  theory of evolution. However,  for  decades , the status of this concept has been debated , and  many questions have been raised by  philosophers and biologists alike . What is the definition  of fitness? What does being fitter really mean, in scientific terms ? How  can fitness be  measured ? In  recent years , new ideas  have  emerged within the scientific community  which  might shed some new light on our understanding of fitness. However, their  relationship to  the  debate concerning fitness still need s to be established.  Two things , among many others,  are  particularly  worth mentioning here : first , the theory of niche construction ,  which invites us to  think of  an  environment  not  as  being  granted  to  organisms , but  as  created by them . Thus this  theory  transforms our understanding of environments, a concept which  figures  frequently  in  fitness literature. Second , microbiology teaches us that plants and animals interact with many  symbiotic microorganisms.  Moreover,  these  microbes exert  a  major impact on  the fitness of  these plants and animals ,  thus expanding our knowledge of the factors that determine  fitness. The question is  whether – and  if so,  how – these discoveries influence the debate concerning  fitness. The aim of the workshop is  to  explore this question.

Keynote Speaker:

Lynn Chiu is a philosopher of biology  affiliated with the ImmunoConcept Lab of  the  University of Bordeaux/CNRS , which operates  at the intersection of  biology and philosophy.  Her past research and current interest s concern many important problems  found at the frontiers of  the  philosophy of biology,  such as  the  philosophy of perception, niche  construction,  symbiosis , and biological individuality.  Learn more about Lynn here : https://sites.google.com/view/lynnchiu/

Program (click to enlargen)

 

General Information

Organizers: Institute of Philosophy, Jagiellonian University
Coordinator: Adrian Stencel

Who can apply?

Philosophers, biologists, medical doctors, and any other scholars, at any point in their career,  who are interested in this subject .

Where  and  when  will  the workshop  be held ?

In  Kraków,  6th and 7th of  June 2019 .

How to apply?

Send  an  abstract (max imum 500 words) before 31 March 2019 to:  philbio.workshops@gmail.com
All decision s will be made  prior to 30 April  2019 .

 

This workshop is supported by

 

Trends in Cancer: what is the tumor environment?

 
If and how a tumor develops, depends in large part on its surroundings. While scientists agree on the importance of the tumor environment (TE), there is no consensus on how to define and spatially delineate it.
A new paper by Lucie Laplane, Dorothée Duluc, Nicolas Larmonier, Thomas Pradeu and Andreas Bikfalvi lays out six clearly defined layers that surround the tumor: (i) the tumor cell-only environment, (ii) the niche, and the (iii) confined, (iv) proximal, (v) peripheral, and (vi) organismal tumor environment. The authors show the different tumor-promoting or -suppressing mechanisms at work in the different layers and how they impact therapeutic approaches.

 
Click here for more information: The Multiple Layers of the Tumor Environment
Click here for the PDF

Sabina Leonelli on The Epistemology of Data Use

 

The Epistemology of Data Use: Conditions for Inferential Reasoning in the Age of Big Data Science
Sabina Leonelli (University of Exeter, UK)
Dec 1st, 2017
Center for Philosophy of Science, University of Pittsburgh (USA)
ABSTRACT: This talk examines the epistemology of data by addressing the challenges raised by ‘big data science’, and particularly the dissemination and re-use of large datasets via intricate and nested infrastructures such as digital databases. Empirically, my analysis is grounded on the in-depth qualitative study of “data journeys”, that is ways in which datasets are circulated and used for a variety of purposes across several different contexts. Conceptually, the talk brings my previous work on the relational nature of data to bear on existing philosophy of inductive reasoning and the triangulation of multiple lines of evidence (most prominently by John Norton, Alison Wylie and William Wimsatt), with the aim of outlining conditions under which big data can be used to reliably inform inferential reasoning. I conclude by highlighting five ways in which data science that fails to operate under such conditions could significantly damage scientific methods and the credibility of research outputs.
 

PhilInBioMed joins the EASPLS!

The Institute for Philosophy in Biology and Medicine joins the European Advanced Seminar in the Philosophy of the Life (EASPLS).
The EASPLS gathers the following institutions:

Centre for the Study of Life Sciences, University of Exeter
IAS-Research Center for Life, Mind & Society, University of the Basque Country, San Sebastian
Institut d’Histoire et de Philosophie des Sciences et des Techniques (IHPST) Paris-1 Sorbonne
Institute of Philosophy, Leibniz University Hannover
Faculty of Sciences and Department of Philosophy/Faculty of Humanities, University of Geneva
KLI (Klosterneuburg/Vienna)
PhilInBioMed (CNRS & University of Bordeaux)

 
The next EASPLS meeting will be held at the Konrad Lorenz institute for Evolution and Cognition Research (KLI), Klosterneuburg (Austria), September 10-14, 2018.